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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889797.1_cds_XP_016444461.1_39520
CDS Infomation

[gene=LOC107769735] [db_xref=GeneID:107769735] [protein=ribosomal RNA small subunit methyltransferase H-like] [protein_id=XP_016444461.1] [location=complement(join(16576..17000,17184..17376,19326..19394,20038..20289,20633..21046))] [gbkey=CDS]
Sequence

ATGGCAAGGTTAATCCGAAACCTTTTCTTTCACTCTTCCACCATTCCGCCACCGGTACCT
CCGCCGCTCAAATTCCACCACCTCCGCCGTATCCACGCCGGCAACAGCTTATCCGCTTCC
GCTTCCGCTTCCGCTTCAGCTTCAGTTCACAGTAAACCTCGGAAAAACAAAGTAAAAAAG
GTGGAAAAGACCAGTAATAGTAGCGTAATTAGCCAGAACAAACTTTCACAAGTGAAACGG
AGGACCCGGTCGGAGAAAGAGCTGGATGAGGAGACCTTCCTGAAGCACTATGGAAATGAC
AACTCTACCCCCCATGTTCCTGTCTTGCTCGGCGAAGTTTTGGATGTTTTCGCCTCCGTC
ACTCTCCGCTCTTTCCTTGATTGTACCCTCGGTGCCGCCGGCCATTCCTCTGCTATAGTT
CGGGCTCATTCCGAAATGCAAGTATATGTTGGGCTTGATGTTGATCCCATTGCACATCAA
ATGGCTCAAACTCAGCTGAAGGGTATCCAACCTAAGGACTCTTATGATACGGCTTCTGCC
TTGAAAGTGCATGCCTTTTTGAAAAATTTTAAGGACGTCAAGTTTGTGCTTGGTGAAGTG
TCAGATGACTTATTGGCCTGTGGAGTTGATGGGATCTTGATGGACTTGGGTATGTCATCT
ATGCAGGTAAATGATGCTGAAAGAGGTTTTAGTGTGCTGAAGAATGGACCTCTTGACATG
AGAATGAATCCAAAGGCAACTCTGAGAGCTGAAGACATATTGAATTCCTGGCCAGCTGAT
GAACTAGGACGGGTTCTGCGAGACTATGGAGAAGAAAGCAATTGGTACTCTCTTCAAAAC
AGAATTGTTAAGGCTCGTCTACATGGAGGGTTACATTCTACCAGTGAGCTGGTAGACCTT
ATTCAGAATTCAACTTCTAGGACTAAAGGAAGACAAGGTTGGATTAAGACAGCCACAAGA
GTTTTTCAGGCTTTACGAATAGCTGTTAATGATGAACTCAAGACACTGGAGGATTCCATC
CGTGATTGTTTTGAGTCTCTTAATTCTGGTGGAAGGCTTGCCGTAATTTCATTCCACAGT
TTGGAGGACAGAATAGTAAAACAGGCATTTCTCAATATTATGAACTGCAGCGAAGTTGAT
GGAGGTGGGATTGAAGATGAAGAAGGGAAGTGCTTACGTGAGCTGAGGAAAATTAATCTT
GATACTGTTAAAGAAGAAGCATGGATAAAACAAGTGATACAAGGACAGAATGGAACTATC
CTTACAAAGAGACCCATAACACCATCTGAAAAGGAGGAGGCATTAAATCCTCGAAGTCGG
AGTGCTAAACTACGAGTGATTCAAAAAGCCTGA

Peptide Sequence

PEP ID

XP_016444461.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase H-like [Nicotiana tabacum]
Sequence

MARLIRNLFFHSSTIPPPVPPPLKFHHLRRIHAGNSLSASASASASASVHSKPRKNKVKK
VEKTSNSSVISQNKLSQVKRRTRSEKELDEETFLKHYGNDNSTPHVPVLLGEVLDVFASV
TLRSFLDCTLGAAGHSSAIVRAHSEMQVYVGLDVDPIAHQMAQTQLKGIQPKDSYDTASA
LKVHAFLKNFKDVKFVLGEVSDDLLACGVDGILMDLGMSSMQVNDAERGFSVLKNGPLDM
RMNPKATLRAEDILNSWPADELGRVLRDYGEESNWYSLQNRIVKARLHGGLHSTSELVDL
IQNSTSRTKGRQGWIKTATRVFQALRIAVNDELKTLEDSIRDCFESLNSGGRLAVISFHS
LEDRIVKQAFLNIMNCSEVDGGGIEDEEGKCLRELRKINLDTVKEEAWIKQVIQGQNGTI
LTKRPITPSEKEEALNPRSRSAKLRVIQKA

Transcript Sequence

Gene sequence data has not been registered.